Debian Bookworm

BioConductor methods for single-cell RNA-Seq data analysis

Collection of Public Single-Cell RNA-Seq Datasets

BioConductor single-cell RNA-Seq analysis utilities

GNU R sequence logos for DNA sequence alignments

GNU R classes and methods for high-throughput short-read sequencing data

S4 Classes for Single Cell Data

BioConductor reference-based single-cell RNA-Seq annotation

BioConductor SnpMatrix and XSnpMatrix classes and methods

BioConductor summary statistics for rows and columns of sparse matrices

Search Tool for the Retrieval of Interacting proteins database

Variant annotations for structural variants

BioConductor assay container

GNU R Surrogate Variable Analysis

GNU R/Bioconductor package for integrative analysis with GDC data

Data for the TCGAbiolinksGUI package

GNU R Transcription Factor Binding Site (TFBS) Analysis

Subclonal copy number and LOH prediction from whole genome sequencing

Transcript Quantification Import with Automatic Metadata

transcript-level estimates for biological sequencing

GNU R various transcript abundance quantifiers

BioConductor annotation of genetic variants

GNU R wrench normalization for sparse count data

BioConductor representation and manpulation of external sequences

(Virtual) zlibbioc Bioconductor package

GNU R abind multi-dimensional array combination function

GNU R package for regression transformations

GNU R actuarial functions and heavy tailed distributions

GNU R analysis of ecological data

GNU R exploratory analysis of genetic and genomic data

GNU R lattice-based package for the representation of multivariate data

GNU R exploratory analyses for the phylogenetic comparative method

Adrian Dusa's Miscellaneous GNU R functions

Applied Econometrics with R

GNU R package for analyzing factorial experiments using ANOVA or mixed models

GNU R AIRR data representation reference library

Immunoglobulin Clonal Lineage and Diversity Analysis

Another Multidimensional Analysis Package

GNU R package supporting multiple imputation of missing data

GNU R: A MORE flexible neural network package

GNU R gallery of animations and utilities to create animations

Affinity Propagation Clustering

GNU R package for Analyses of Phylogenetics and Evolution

Another Plot PACKage: stem.leaf, bagplot, faces, spin3R and others

GNU R command line parser for optional and positional arguments

GNU R command-line argument parser

Data Analysis Using Regression and Multilevel/Hierarchical Models

arsenal of GNU R functions for large-scale statistical summaries

safe password entry for GNU R, Git, and SSH

GNU R lightweight core of the 'assertive' package

GNU R assertions to check properties of sets